The Rainey Lab
Dal logo Department of Biochemistry & Molecular Biology

Halifax, Nova Scotia Canada
Dal/NRC Chemical Biology & Chemical Biophysics Journal Club

Location: see chart - alternate Tuesdays @ 12-1 pm. 

Note: members/PI's of other groups are welcome - please contact Jan

Contact: Jan Rainey

Date PI presenter Trainee (or other) presenter Location
Jan 24/12
Blouin
Mitternacht & Berezovsky. (2011) PLoS Com Biol - link
Rainey/Liu groups - Aditya Pandey
Yoshiura et al. (2010) JACS  - link
McCain 1102
Feb 7/12 Rainey
Trinh et al. (2012) Structure - link
Jakeman group - Andrew Robertson
Pahari et al. (2012) Angew Chem - link
McCain 1102
Feb. 21/12 Bearne
Mylslinski et al. (2011) JACS - link
Jakeman group - Stephanie Forget
Gantt et al. (2011) Nature Chem Biol - link
McCain 1102
Mar. 6/12 Liu
Teulé et al. (2012) PNAS - link
Blouin group - Sergio Hleap Lozano
Pentony et al. (2012) Genome Biol Evol - link
McCain 1102
Mar. 20/12 Byers
Phillip et al. (2012) PNAS - link
Bearne group - Mitesh Nagar
Guan et al. (2011) Biochemistry - link
McCain 1102
Apr. 3/12Jakeman group - Matt Loranger
Jongkees & Withers (2011) JACS - link
Alex Cohen
Kiselar & Chance (2010) J Mass Spectrom - link
McCain 1102

Archive
Jan 17/08 Bearne
Jan 31/08 Ewart
Link to abstract (Doxey et al., Nature Biotechnol 2006)
PDF
Rainey Group - Tyler Reddy
Link to html paper (Cady et al. JACS 2007)
PDF
Feb 14/08 Blouin
Link to paper

Feb 28/08 Rainey
Lemieux et al., PNAS 2007 PubMed link
Byers Group - Peter Murphy
PubMed link
Mar 13/08 Syvitski
Classen et al. JACS 2005 - link to abstract
Float - David Jakeman
Zhang et al. Science 2006 - link to abstract
Mar 27/08 Byers
Zhu et al. Biochemistry 2008 - link to abstract
Bearne Group - actually, Bearne himself :)
Benkovic et al. Biochemistry 2008 - link to abstract
Apr 10/08 Jakeman
Glaze et al., Biochemistry 2008 - link to abstract
Float - Daniel Gaston - to be resceduled.
del Sol & Carbonell, PLoS Comp Biol 2007 - link to paper
Apr 24/08 Bearne
Antikainen et al., Biochemistry 2005 - PubMed link
Rainey Group - David Langelaan
Hansen et al., JACS 2008 - link to paper
May 8/08 Ewart
Garnham et al., Biochem. J. 2008 - Link to paper
Byers Group - Elden Rowland
Sun et al., Anal. Chem. 2006 - PubMed link
CS Auditorium
May 22/08
*11 am*
Blouin
Xie & Bourne, PNAS 2008 - Link to abstract
Ewart Group - Elke Uribe
Monaghan et al., Biochemistry 2008 - Link to abstract
Teaching lab 2, 1st floor CS (143)
June  5/08 Rainey
Madine, Doig & Middleton, JACS 2008 - PubMed link
Float - Gerrit Volkman
Horst, Fenton, Englander, Wüthrich & Horwich, PNAS 2007 - link
GINIUS meeting room, 4th floor CS
June 19/08 Syvitski
Boas & Harbury, JMB 2008 - PubMed link
Bearne Group
Fan et al., Biochemistry 2008 - PubMed link
GINIUS meeting room, 4th floor CS
July 3/08 To be rescheduled: Ewart
Strambinin & Gonnelli, Biochemistry 2008 - Link
Social outing - lunch at Grawood in SUB Grawood, SUB
July 17/08 Byers
Zhou et al., JACS 2008 - Link
Float - Daniel Gaston (rescheduled from Apr 10)
del Sol & Carbonell, PLoS Comp Biol 2007 - link to paper
GINIUS meeting room, 4th floor CS
July 31/08 Bearne
Bharat et al., PNAS 2008 - PubMed link
Rainey Group - Tyler Reddy
Stelzer et al., Biophys J. 2008 - PDF or PubMed link
CS Auditorium, 1st floor CS (127)
Aug 14/08 Jakeman "double whammy"
1) Yuan et al., PNAS 2007 - PubMed link
2) Lovering et al., Science 2007 - PubMed link

Informatics room, 4th floor CS
Aug 28/08 Break week
Sept 9/08 Rainey
Cisneros et al., Structure 2008  - Pubmed link
Byers group - Peter Murphy
Bordelon et al., Proteins 2008 - Pubmed link
McCain 2162
Sept 23/08 Byers
Cao et al. PNAS (2008) - Pubmed link
Float - Gerrit Volkman
Ramachandran et al. Nature Methods (2008) - link
McCain 2162
Oct 7/08 Bearne group - Alexander Roy
Rescheduled to Oct. 21st
Rainey group - David Langelaan
Tan et al. JBC (2006) - link
McCain 2162
Oct 21/08 Ewart
Strambini & Gonelli Biochemistry (2008) - link
Bearne group - Alexander Roy
Torrent et al. Biophys J (2008) - paper
McCain 2162
Nov 4/08 Blouin
Benson & Daggett Protein Sci (in press) - PDF
Bearne group McCain 2162
Nov 18/08 Wallace
Supervisory Committee Meeting for Dr. Wallace
Ewart group - Elke Uribe
Wang et al. PNAS (2008) - link
McCain 2162
Dec 2/08 Syvitski
Scheffel et al. Nature (2006) - link
Jakeman group - Ali Sadeghi-Khomani
Macauley et al. JBC (2005) - Pubmed link
McCain 2162
Dec 16/08 Jakeman - to be rescheduled
Tailfor et al. Nature Chem Biol (2008) - Pubmed link
Rainey group - Tyler Reddy
Ma et al. PNAS (2008) - Pubmed link
McCain 2162
Jan 13/09 Bearne
Lewis & Wolfenden (2008) PNAS  - Pubmed link
Byers Group
Colizzi et al. (2008) J Chem Inf Model - link
GINIUS meeting room, 4th floor CS
Jan 27/09 Byers Group - Elden Rowland
Kim & Beauchamp (2009) J Am Soc Mass Spec - Pubmed link
Rainey Group - Marie Tremblay
Khoshnoodi et al. (2006) JBC - link
Rowe 3089
Feb 10/09 Ewart
Graham et al. (2008) Biochemistry - Pubmed link
Jakeman Group - Andrew Robertson
Yi et al. (2008) JACS - Pubmed link
Dean's Council Room, C-206, 2nd floor CRC building
Mar 3/09 Rainey
Degen et al. (2009) PNAS - Pubmed link
Blouin
Sadqi et al. (2009) PNAS - link
Pharmacy 109
Mar 17/09 Blouin Group - Julia Barnes
DeBartolo et al. (2009) PNAS - Pubmed link
Bearne Group
Darley et al. (2009) Org Biomol ChemPubmed link
NRC-IMB Seminar Room
Mar 31/09 Syvitski
Simberg et al. (2007) PNAS - link
Wallace Group - Stacy MacDonald
Emesh et al. (2009) Biochemistry Pubmed link
Tupper 3H1
Apr 14/09 Jakeman
Tailford et al. (2008) Nature Chem Biol - Pubmed link
Ewart Group - Elke Uribe
Bottcher & Sieber (2008) Angew Chem Int Ed - Pubmed link
NRC-IMB Seminar Room
Apr 28/09 Bearne
Spies et al. (2009) JACS - Pubmed link
Float - Gerrit Volkman
Puchner et al (2008) PNAS - link
Dean's Council Room, C-206, 2nd floor CRC building
May 19/09 Rainey
Shi et al. (2009) Biophys J PDF link
Jakeman Group - Matt Loranger
Gantt et al. (2008) Angew Chem Int Ed. - Pubmed link
Computer Science 311
Jun 9/09 Byers
Niwa et al. (2009) PNAS - link
Rainey Group - David Langelaan
Stoddart et al. (2009) PNAS  - Pubmed link
Rowe 1007
Jun 23/09 Wallace
Tuller et al. (2007) Protein Sci - Pubmed link
Lunch at the Grawood (SUB) Rowe 1007 & The Grawood
Jul 7/09 Ewart
Nerelius et al. (2009) PNAS  - Pubmed link
Rainey
He et al. (2009) J Phys Chem B - link
Rowe 1007
Jul 21/09 Bearne
Ho et al. (2009) NaturePubmed link
Bearne Group - Sander Roy
Powell (2009) Nature - link
Rowe 1007
Aug 4/09 Blouin
Prada-Gracia et al. (2009) PLoS Comp Biol - link
Blouin Group - Julia Barnes
Neuwald (2007) TiBS - Pubmed link
Rowe 1007
Aug 18/09
Byers Group - Peter Murphy
Bhunia et al (2009) JBC - link
Rowe 1007
Sep 1/09 Syvitski
Saccenti & Rosato (2008) J Biomol NMR - link
Jolene Read (Duncan & Rainey groups)
Vavouri et al. (2009) Cell - Pubmed link
Rowe 1007
Sep 15/09 Dr. Nadine Merkley (Syvitski Group)
Columbus et al. (2009) JACS - Pubmed link
Rainey Group - Tyler Reddy
Gross et al. (2009) Science - Pubmed link
McCain 2116
Sep 29/09 Jakeman
Bernardes et al. (2008) JACS - link
Dr. Gerrit Volkman
Floyd et al. (2009) JACS - link
McCain 2116
Oct 13/09 Bearne
Lam et al. (2009) Science - Pubmed link
Byers Group - Dr. Germaine Tami
Misra et al. (2009) Molecular Biosystems - link
McCain 2116
Oct 27/09 Rainey
Hatzakis et al. (2009) Nature Chem Biol - link
Ewart Group - Elke Uribe
Los et al. (2008) ACS Chem Biol - link
McCain 2116
Nov 10/09 Ewart
Gatti-Lafranconi et al. (2009) J Mol Biol - link
Bearne Group - Mitesh Nagar
Pisliakov et al. (2009) PNAS - link
McCain 2116
Nov 24/09 Blouin
Fazelinia et al. (2008) Protein Sci - link
Jakeman Group - Andrew Robertson
Lewis et al. (2009) PNAS - link
McCain 2116
Dec 8/09 Byers
Crawford et al. (2009) Nature- link
Pre-break lunch at Grawood? Rowe 1007
Jan 19/10 Bearne
Goto et al. (2009) JBC Pubmed link
Byers Group McCain 2021
Feb 9/10
(note date change)
Jakeman
Goličnik et al. (2009) JACS - link; starts from Lahiri et al. (2003) Science - link
Rainey Group - David Langelaan
Schierling et al. (2010) PNAS - Pubmed
McCain 2021
Feb 16/10 Ewart
Fischer et al. (2009) PLOS Biol - link
Jakeman Group
Li et al. (2009) PNAS - link
McCain 2021
Mar 2/10 Syvitski
Han et al. (2001) Nature Struct Biol - link
Bearne Group - Sander Roy
Orban et al. (2010) Biochemistry - link
McCain 2021
Mar 16/10  Rainey
Wong et al. (2009) PNAS  - link - & lead-up papers
Bearne
Obata & Nakasako (2010) Biochemistry - Pubmed
McCain 2021
Apr. 13/10
(date change)
Byers
Bachovchin et al. (2009) Nature Biotechnol - link
Dr. Paul Liu McCain 2021
Apr 20/10 Blouin
Ferrada & Wagner (2008) Proc Biol Soc - link
Syvitski Group - Dr. Nadine Merkeley
Makela et al. (2010) J Magn Reson - link
McCain 2021
June 8/10 Bearne
Sattar et al. (2010) Chem Commun - link
Jakeman group - Dr. Debabrata Bhattasali
Batra et al. (2010) JACS - link
McCain 1102
June 22/10 Jakeman
Greig et al. (2009) JACS  - link
Rainey group - Dr. Pascaline Ngweniform
Tantry et al. (2010) Biochemistry - link
McCain 1102
July 6/10 Byers
Uttamapinant et al. (2010) PNAS - link
Bearne group
Kolodkin-Gal et al. (2010) Science - link
McCain 1102
July 20/10 Blouin
Awile et al. (2010) PLoS Comp Biol  - link
Jakeman group
Bhat et al. (2010) Nature Chem - link
McCain 1102
Aug. 3/10  Rainey
Gautier et al. (2010) Nat Struct Mol Biol - link
Byers group - Peter Murphy McCain 1102
Aug. 17/10
Syvitski
Sengupta et al. (2008) BBA - link
Jakeman group - Erin Feldman
Wyatt et al. (2010) Science - link
McCain 1102
Oct 5/10
Bearne
Xia et al. (2010) Biochemistry - link
Byers group - Peter Murphy
Aitken & Puglisi (2010) Nat Struct Mol Biol - link
McCain 2162
Oct 19/10 Rainey
Korzhnev et al. (2010) Science - link
Jakeman group - Matt Loranger
Pesnot et al. (2010) Nature Chem Biol - link
McCain 2162
Nov 2/10 Jakeman
Truman et al. (2009) Chem Biol - link
Bearne group - Mitesh Nagar
Go et al. (2010) JACS - link
McCain 2162
Nov 16/10 Syvitski group - Dr. Nadine Merkley
Kramer & Kleinpeter (2010) J Magn Reson - link
Rainey group  - Marie-Laurence Tremblay
Kodera et al. (2010) Nature - link
McCain 2162
Nov 30/10 Byers
Höhne et al. (2010) Nature Chem Biol - link
Jakeman
Yang et al. (2010) Org Biomol Chem - link
McCain 2162
Dec 14/10
Blouin
Cossio et al. (2010) PLoS Comp Biol - link
End of term lunch(?)
Blouin group - Sergio Hleap Lozano
McCain 2162
Jan 18/11
Bearne
Stockbridge et al. (2010) PNAS - link
Rainey group - Tyler Reddy
Le et al. (2010) PLoS Comp Biol - link
McCain 2102
Feb 1/11 Jakeman
Xu et al. (2011) JACS - link
Bearne group - Mandar Khanal
Lyons & Fricker (2010) JBC - link
McCain 2102
Feb 15/11 Blouin
Zhang et al. (2007) Biohphys Chem - link
Jakeman group
Hadi et al. (2011) JOC  - link
McCain 2102
Mar 1/11 Syvitski
Ludwig et al. (2008) J Med Chem - link
Blouin group - Jose Sergio Hleap Lozano
Siltverg-Liberles (2011) Mol. Biol. Evol. - link
McCain 2102
May 17/11
Bearne
Rosten & Kohen PNAS 2010 - link
Rainey group - Aaron Banks
Goldfeld et al. PNAS  2011 - link
Computer Science 311
May 31/11 Jakeman
Liu et al Nature Chem Biol 2011 - link
Bearne group - Sander Roy
Bar-Even et al. Biochemistry 2011 - link
McCain 1102
June 21/11 Rainey
Yang et al. JACS 2011 - link
Jakeman
Liu et al Nature Chem Biol 2011 - link
McCain 1102
July 5/11 Liu
Du et al. JACS 2011 - link
Rainey group - Muzaddid Sarker
Cook & Opella BBA 2011 - link
McCain 1102
July 19/11 Blouin
Gao et al. JACS 2011 - link
Byers
Wong et al. Biochemistry 2011 - link
McCain 1102
Aug 2/11
Jakeman
Kwan et al. Angew Chem 2011 - link
Blouin group - Sergio Hleap
Knight et al. PLoS One 2007 - link
McCain 1102
Oct 4/11
Bearne
French et al. (2011) JMB - link
Rainey group - David Langelaan
Kremer et al. (2011) JACS - link
McCain 2021
Oct 18/11 Jakeman
Lee et al. (2011) Nature Chem Biol - link
Bearne group - Mandar Khanal
Brantley et al. (2011) Science - link
McCain 2021
Nov 1/11 Byers
Guy et al. (2011) PNAS - link
Jakeman group
Quinlan et al. (2011) PNAS - link
McCain 2021
Nov 29/11 Alex Cohen
Petrotchenko et al. (2010) Mol Cell Proteomics  - link
Rainey/Liu groups - Lingling Xu
Gaines et al. (2010) JBC  - link
McCain 2021
Postponed to Jan. 2012 Blouin
Rainey
McCain 2021

Last Update: Apr 2 2012